Insertion junction: CLIP2.020222_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020222
Chromosome:chromosome 9
Location:4618273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401663 (1 of 1) K14795 - ribosomal RNA-processing protein 36 (RRP36) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGTCGGTCTCGGTGTCGGGTTCTGTGGGTGAGAGGGTGAGGGAGTG
Internal bar code:GAGAGAAAATGTGTTGTTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4852
LEAP-Seq percent confirming:98.5916
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGATTGGGCATGGAGGTG
Suggested primer 2:CCAGATTTACGCGCCACATG