Insertion junction: CLIP2.020222_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020222
Chromosome:chromosome 9
Location:4618290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401663 (1 of 1) K14795 - ribosomal RNA-processing protein 36 (RRP36) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGCGTTCTTCTTGCGCCTCTTCTCCATGAACTTGTCCAGCTTGCCG
Internal bar code:ACGTCCAAGGTATATGGCATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:395
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGATTTACGCGCCACATG
Suggested primer 2:AAGGATTGGGCATGGAGGTG