Insertion junction: CLIP2.020226_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020226
Chromosome:chromosome 10
Location:1486922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428600 (1 of 13) PF00646 - F-box domain (F-box) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCCCACACGAACACGGCGCCATTGTCCGCCCGCCCCAACAACACGTC
Internal bar code:GCAGGGTGCGTGCGAGCCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1270
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTTCACCGCTGTTCTCC
Suggested primer 2:ACCCAAACCCGTTCCAATGT