Insertion junction: CLIP2.020230_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020230
Chromosome:chromosome 12
Location:9823834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546877 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGTGCACCTACCTACCTCAAGCAGCTACCTAACCAAGCGCTCGTGT
Internal bar code:GTCTCCCCTTCATTGTTAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2620
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGAACGAAGACGCCAT
Suggested primer 2:GCCTCTCCTGGGTCTCAGTA