Insertion junction: CLIP2.020250_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020250
Chromosome:chromosome 3
Location:8251472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g199800 HYD1,HYDA1 (1 of 2) 1.12.7.2 - Ferredoxin hydrogenase / Uptake hydrogenase; Iron hydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGGTTGCCAGGAAAGAGGGTTCTCGAGTCCGCGCTGGCCCTGGAAA
Internal bar code:CTATTTTCGAAGTGACTTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1389
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTCCTCACACACCCCAA
Suggested primer 2:GCCCTTCTTTTCCGCTAGGT