Insertion junction: CLIP2.020252_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020252
Chromosome:chromosome 14
Location:3619433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g631000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGTGAATGCGGTACAGCCGCACAGCCGAGCCGCCAAGCTGGCGCGC
Internal bar code:ACGAGTCAATGAGCGACGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGTTTCGACAAGACCCG
Suggested primer 2:CGATGTGGATGAGGTGGAGG