Insertion junction: CLIP2.020253_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020253
Chromosome:chromosome 17
Location:6498088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744497 (1 of 1) PF09783 - Vacuolar import and degradation protein (Vac_ImportDeg) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCCTCCTCAGGGAGAGCCGCAGGGGCCGGAGCCGAGGCGGGCGCGAC
Internal bar code:AGTGTGGTCGTGTTGCGGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2931
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCCCGGAATGAATGCAG
Suggested primer 2:TGGACACACACACACACACA