Insertion junction: CLIP2.020260_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020260
Chromosome:chromosome 16
Location:6273928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676300 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCAGGAGGTCTCTTTCCACTTGGCGCTGTCTCACACGTGAGTCGAC
Internal bar code:TACCTGTAAGTCAGGCATATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2653
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGCGATAATGGTACGGC
Suggested primer 2:CCGGATTGTTGCCTACCCTT