Insertion junction: CLIP2.020263_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020263
Chromosome:chromosome 7
Location:5638713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352450 SDR10 Short-chain dehydrogenase/reductase; (1 of 3) 1.1.1.30 - 3-hydroxybutyrate dehydrogenase / D-beta-hydroxybutyrate dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGGGCAAAGTTGGTGCGGGTTCGTGTTTGCATCGCGGCAGCAGGC
Internal bar code:AGTAGACGAAGCTCGCCGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:909
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAACGGTGCTGTTCATCA
Suggested primer 2:CTCACGTGTCTGTGACGTCA