Insertion junction: CLIP2.020266_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020266
Chromosome:chromosome 14
Location:2970508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627500 (1 of 1) PTHR18937//PTHR18937:SF259 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGGACAACGGACAACCCAACCACCCAACCGCCTAACCACCCAGCCAC
Internal bar code:GCTTGAGAGACCTCTAGTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:963
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTACTGGGTCCGTTTTG
Suggested primer 2:CCATAAAGCGTGCACGAACC