Insertion junction: CLIP2.020270_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020270
Chromosome:chromosome 7
Location:3310187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334650 (1 of 1) K10695 - E3 ubiquitin-protein ligase RNF1/2 [EC:6.3.2.19] (RNF1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGACAAGCCTCTAGACGGCCTGAGCTGCTGCTCTCTGCCCTGTCCTCCT
Internal bar code:GTAATGGTATTTTGCTAACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2073
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCCTTTCGGCCCTCAAC
Suggested primer 2:ATTAGCGGGTATTCGGCCAG