Insertion junction: CLIP2.020278_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020278
Chromosome:chromosome 1
Location:1692712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009325 (1 of 2) 1.14.11.18 - Phytanoyl-CoA dioxygenase / Phytanoyl-CoA hydroxylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCTGGCAAGCAGCTGTAAGCGGGGCGCACCACCTCGAAAACGCAAC
Internal bar code:GCGCATATGCATTTAGCAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2287
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:110
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAAGAGCCGAGCTATGCA
Suggested primer 2:GCTACTGCCCTCGCCATTAT