Insertion junction: CLIP2.020278_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020278
Chromosome:chromosome 12
Location:8217745
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTAAGCCACACTGTCGTCGTCCAGGATCGAACTGGAGACCTTTCGCG
Internal bar code:GTAAGTAAAAGGAGTTTCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2525
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAACTACACCACGACGAC
Suggested primer 2:TCGGATGTGTATCTGCTGGC