Insertion junction: CLIP2.020294_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020294
Chromosome:chromosome 11
Location:885487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467651 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGAGAGCGCGCAGGCGTGGGCAACACCGACTGGCAACACGGCCATTG
Internal bar code:CGTTGCGATTCGACGCACTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1609
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCTTAGCTAGCTCGCTG
Suggested primer 2:ACGGCGTCTTCACAGGTAAG