Insertion junction: CLIP2.020305_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020305
Chromosome:chromosome 6
Location:6771513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295950 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR
Cre06.g800726 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCAGGCTATCCAGCCGGTGGAGCCGCTAATGGTGCCAGTGAAGGTC
Internal bar code:TGCATTATGGTAAACATCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1423
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGATGAGCACCTCTACG
Suggested primer 2:ATTTGCCAGCAGTCGAGACA