Insertion junction: CLIP2.020316_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020316
Chromosome:chromosome 4
Location:2932736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224650 FAP296 (1 of 1) PTHR23316//PTHR23316:SF0 - IMPORTIN ALPHA // IMPORTIN SUBUNIT ALPHA; Flagella-Associated Protein 296, similar to Importin Alpha intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACTCCTCCCTTCGCCCTGCATCATGCAGCTCGAGGCGGCGTGGGCGT
Internal bar code:TCGCAAATCGAATACGGGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:922
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTACCTATCCCGTCACCA
Suggested primer 2:GGGATTGATGGCGGGACTAG