Insertion junction: CLIP2.020318_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020318
Chromosome:chromosome 4
Location:3096451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225650 (1 of 1) PF00031 - Cystatin domain (Cystatin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTTGTAGCGCGAGCGCTGAGCTCACCGACCACCGGAGAGACCTCCAG
Internal bar code:CCAAAGCGGGCTGTTTCCAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3838
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCGGGTATTCGACGAGC
Suggested primer 2:TGAGCAGGCCCGAATTGAAT