Insertion junction: CLIP2.020323_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020323
Chromosome:chromosome 1
Location:2970845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018650 (1 of 1) PF01342//PF13771 - SAND domain (SAND) // PHD-like zinc-binding domain (zf-HC5HC2H) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCATCCTGACGCCGCCCGAGGACGAGCAGCCGCTGCCGGCGGATGCTG
Internal bar code:ATCTGGGCATGTTATTTCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGCAACTTACCACGAGA
Suggested primer 2:CTGAATCCGAGGTAGGACGC