Insertion junction: CLIP2.020330_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020330
Chromosome:chromosome 1
Location:1960083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010832 (1 of 1) PTHR12411:SF389 - CATHEPSIN L1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCACTCTCAAGTACGGTACTCGCCCCCACCTGGCCGCCCCAGGGGCTG
Internal bar code:ACCGTATTTCGATGGCGGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1277
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAAGACACGGCAAGCAGA
Suggested primer 2:CTGCTGGGCCTTGTGAGTTA