Insertion junction: CLIP2.020330_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020330
Chromosome:chromosome 1
Location:1960086
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010832 (1 of 1) PTHR12411:SF389 - CATHEPSIN L1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCGCCAGGGGACAGGGGGCAGGGGCTAGCTGGGCCCGTGAAACGCAC
Internal bar code:ACCGTATTTCGATGGCGGTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1081
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGGGCCTTGTGAGTTA
Suggested primer 2:ATCAAGACACGGCAAGCAGA