Insertion junction: CLIP2.020331_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020331
Chromosome:chromosome 6
Location:7920613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304050 PKC1 Protein Kinase C; (1 of 3) K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCCTCACACAACTGCGGTGCAGGACCAACAGACGGCACATGCGGATG
Internal bar code:TGGATTTCTTAGCGTGCTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2945
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAAGGAACATGACGATGC
Suggested primer 2:CGGACCTGCTCGGACTTATC