Insertion junction: CLIP2.020331_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020331
Chromosome:chromosome 6
Location:7920617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304050 PKC1 Protein Kinase C; (1 of 3) K15710 - E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 6.3.2.19] (SHPRH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCTGAACTGCGGCGACAGCAGAAAGCGGCGGGTGGCAGGTTGCCCGA
Internal bar code:TGGATTTCTTAGCGTGCTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2608
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACCTGCTCGGACTTATC
Suggested primer 2:GCGAAGGAACATGACGATGC