Insertion junction: CLIP2.020332_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020332
Chromosome:chromosome 3
Location:5362957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183350 SRH7 SNF2-related DNA/RNA helicase; (1 of 1) PTHR10799//PTHR10799:SF654 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGTGGCGGAGCGGAATGCTGCGCTGCGCGCCGTGGCAGGCGGCGGCG
Internal bar code:AGACGGTGTTTTGTTCCGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1323
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAGGAAACGAAAGCCCGC
Suggested primer 2:TCACTCAGCGTCAACAGCAT