Insertion junction: CLIP2.020336_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020336
Chromosome:chromosome 16
Location:665897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691755 CDS
Cre16.g691756 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAGCCTGGATTTCAAGCGGTCGGACGAGTATAAGTCGTGGTATTCCG
Internal bar code:GGGCGGGTGACCGAGGTGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4054
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGACACCCTCTTGTTCG
Suggested primer 2:GCATTTCCGTGCCAGGTTTT