Insertion junction: CLIP2.020338_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020338
Chromosome:chromosome 3
Location:1603063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152500 (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGCAACCCCAAGCAAGGGACCACATCCCTGATTCCGCACCCAGTCGC
Internal bar code:CCGCCCGAGGGGACGTTAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:371
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCTCCCCATCCACCTGA
Suggested primer 2:CGTGACAAAAGGTCCTCGGA