Insertion junction: CLIP2.020338_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020338
Chromosome:chromosome 3
Location:1603066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152500 (1 of 5) IPR000104//IPR001214 - Antifreeze protein, type I // SET domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTGTGGGGTCTGCGTATCAGCGTGTCTTGCATCGTAGTAGGGGTGCC
Internal bar code:CCGCCCGAGGGGACGTTAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4522
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGACAAAAGGTCCTCGGA
Suggested primer 2:CTACCTCCCCATCCACCTGA