Insertion junction: CLIP2.020344_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020344
Chromosome:chromosome 13
Location:4583712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603450 (1 of 4) PF14159 - CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (CAAD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCGTGGTGTCTGCCCGTCTCGGGCCGCAGGCCCGCCTGTCTGTCT
Internal bar code:AGTGCGGGCCTTAAGTAGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:334
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCACCTTGACAACTGCG
Suggested primer 2:CACCCACACACCTGGTCTAC