Insertion junction: CLIP2.020344_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020344
Chromosome:chromosome 13
Location:4583840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603450 (1 of 4) PF14159 - CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (CAAD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCTCCCCTCCTTGCATCACAGGCATGAACGGCATTCCCGACCCCT
Internal bar code:AATAGGAACGGACCTGTGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:432
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCACACACCTGGTCTAC
Suggested primer 2:CAACCACCTTGACAACTGCG