Insertion junction: CLIP2.020353_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020353
Chromosome:chromosome 6
Location:6822481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g296300 SRR1 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGAGGCGCCGACCTGTGTGTGCGAACGTGTGAGGTAGGAGCGCTG
Internal bar code:CTCTACTACGGGACTGTTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1687
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTGCGATGTTAAGGCTT
Suggested primer 2:TACCGGTAACCCCAAATGCC