Insertion junction: CLIP2.020357_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020357
Chromosome:chromosome 10
Location:4753210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452600 (1 of 1) PTHR33911:SF1 - RRNA-PROCESSING PROTEIN EFG1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACCGGCATGCTGCCTGCACCCTCATCGCAACATGCATTGCTCCGGTC
Internal bar code:CTTTGGGTTTCGTAAATCAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1297
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCTCCTCATCGTCGCTC
Suggested primer 2:GCTCTTGACACCTCTGGCAT