Insertion junction: CLIP2.020358_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020358
Chromosome:chromosome 10
Location:2522142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436100 MLK1 Mixed lineage protein kinase; (1 of 2) PF00069//PF01590//PF07714 - Protein kinase domain (Pkinase) // GAF domain (GAF) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTAAATTTCGGACTGCGGCTAAACCGCCCATCACACGACCAGCTGAG
Internal bar code:GGTGATTGGTGGGTCAACTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5877
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:176
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:176

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGACTACAGACCCAAACC
Suggested primer 2:CAGCTTCAGGATGGAGGCAA