Insertion junction: CLIP2.020363_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020363
Chromosome:chromosome 17
Location:1431772
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706350 (1 of 31) IPR016187 - C-type lectin fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGGCCCTGACACAGTCCTCTGGCTAGCTACCTGAGGTTTGCATGCGC
Internal bar code:TATAGCGGTTAGAGTGATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTGGCAGTTAGTGTGTA
Suggested primer 2:AGCTCCATTTCCAGGACTGC