Insertion junction: CLIP2.020371_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020371
Chromosome:chromosome 16
Location:4658405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667451 TLP3,CAV6 Tubby-like protein; (1 of 5) PTHR10037//PTHR10037:SF62 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SODIUM CHANNEL PROTEIN PARA CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTCGCTCGTCGCCACCTTCAACGTGAGGCCGGGGGCCTCCAAGGAGG
Internal bar code:GATCAGCAAAATGACGTGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4762
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCACATTCTCAACACCGG
Suggested primer 2:GGAGATCATCCTCACAGCCG