Insertion junction: CLIP2.020372_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020372
Chromosome:chromosome 3
Location:5384449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183550 (1 of 3) PTHR15160//PTHR15160:SF4 - VON HIPPEL-LINDAU PROTEIN // PROTEIN F23H11.5 3'UTR
Cre03.g183600 (1 of 1) PF15375 - Domain of unknown function (DUF4602) (DUF4602) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTACACGCTAAGTATGGGTTCCCCACGCCGGCCTTCCGCCCCCGCGCC
Internal bar code:AAGGTGGTCAGGGGTAAACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:964
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGTTCAAAACCACAGGG
Suggested primer 2:AACCTGGCACCGCATTTTTC