Insertion junction: CLIP2.020379_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.020379
Chromosome:chromosome 17
Location:212972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697300 CEP16 Cysteine endopeptidase; (1 of 1) 2.7.11.1//3.4.22.67 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase // Zingipain / Zingibain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGCTGATCAGCCAGAACCCGAAGCGTCACGCCCGCAGCCGCGCCCGC
Internal bar code:GGGTTGAGTGGGAATCGAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2180
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTGTGGCATTTGTTCGG
Suggested primer 2:CCTGTTTGTGTGCATGGGTG