Insertion junction: CLIP2.020392_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020392
Chromosome:chromosome 2
Location:2356826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090850 CLPB3 (1 of 1) PTHR11638//PTHR11638:SF121 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPB3, CHLOROPLASTIC; ClpB chaperone, Hsp100 family CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATCGTGCGCCGGATCTCGTCATCGCGCCCAATCACTGGATCCAGCTT
Internal bar code:ATGGTGTGTTTGAGCTGACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:407
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTAGCCACTACCTCCCT
Suggested primer 2:CATTGCACCTATGTTCGCCG