Insertion junction: CLIP2.020398_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020398
Chromosome:chromosome 12
Location:7385999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g557500 (1 of 1) IPR000104//IPR002073//IPR003607//IPR006189//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // HD/PDEase domain // CHASE domain // 3'5'-cyclic nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAATTACCGCGCACTTTTGAGGGGGTGCGCGGTCCTGGAAAAAAAGTC
Internal bar code:CGTACGGAGAGTGTGGTGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2886
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCCGCAAATACTACTTGC
Suggested primer 2:CTGCTGGTACTGAGAAGGCC