Insertion junction: CLIP2.020398_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020398
Chromosome:chromosome 12
Location:7385999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g557500 (1 of 1) IPR000104//IPR002073//IPR003607//IPR006189//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // HD/PDEase domain // CHASE domain // 3'5'-cyclic nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTTGGCAAAATACTTTATTTACATGCGCGGTGATCGTGCGCGGGTAC
Internal bar code:TCGCGTCGCGTTTAACAAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3556
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGGTACTGAGAAGGCC
Suggested primer 2:CCGCCGCAAATACTACTTGC