Insertion junction: CLIP2.020399_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.020399
Chromosome:chromosome 13
Location:967579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568200 AXL1 Arabinose chain extension enzyme like protein 1; (1 of 3) PTHR10994//PTHR10994:SF69 - RETICULON // PROLINE-RICH PROTEIN 18 CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCTGTCCAGCTGCATGTCCAGGCCTCTGAAGTGGTACCTCTTCATGG
Internal bar code:AGATCCACGACTGTTAGAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTACTACACAGGTGCGTCCC
Suggested primer 2:TGCTGCACGTGTGTTTTGAG