Insertion junction: CLIP2.020400_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020400
Chromosome:chromosome 3
Location:493000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145027 (1 of 14) PF13371 - Tetratricopeptide repeat (TPR_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGAAAGGGTGATGCGTCGGAGAAGTGCGTTTGAGGACGCCGACTCAT
Internal bar code:TCTGGCGATTGAATATAAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1233
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCTAATCAGTCCCTGAC
Suggested primer 2:GCACGCGTGTATTTCGAGTC