Insertion junction: CLIP2.020412_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020412
Chromosome:chromosome 7
Location:1922026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325748 (1 of 1) 3.5.2.9 - 5-oxoprolinase (ATP-hydrolyzing) / Pyroglutamase (ATP-hydrolyzing) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTATGGTGACTCCCGCGGTGGTTGTCTCAAACACGTGCTCGTAGCTGC
Internal bar code:ATTGACCAGGATGTTAAGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1035
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTAATGGGCGCTGGTTGA
Suggested primer 2:TACCCCTCTTACCCACCTCG