Insertion junction: CLIP2.020414_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020414
Chromosome:chromosome 1
Location:6152004
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043750 BBS7 (1 of 1) K16749 - Bardet-Biedl syndrome 7 protein (BBS7); Bardet-Biedl syndrome-7 associated protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCACCTGCAGCGCGGCGTTGCACTGTATGGCCACGGTGAAGATGGG
Internal bar code:AGGATTGTATGGGTTGGACATG

Confirmation - LEAP-Seq

LEAP-Seq distance:391
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAAAACATCCCGCAAA
Suggested primer 2:CACAAGCGAACGAGCACAAA