Insertion junction: CLIP2.020418_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020418
Chromosome:chromosome 9
Location:658552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404800 (1 of 20) IPR008972 - Cupredoxin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGCAGTGTCGTGCCAGATCGTAGCGGTGGCAAAGCGCGTCGCAACTG
Internal bar code:GTAGTGTGTGACGCGGAATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3088
LEAP-Seq percent confirming:98.4848
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTCGAGTCCAAAGTGA
Suggested primer 2:CAGGGCCCTCATGATGTTGT