Insertion junction: CLIP2.020427_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.020427
Chromosome:chromosome 17
Location:1418673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706300 XPD1,RAD3C (1 of 1) K10844 - DNA excision repair protein ERCC-2 (ERCC2, XPD); RAD3/XP-D family DNA-binding helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACAACGTAAAGGGGTTCTTATTGGGGCTAGCTTGTACGGTATTCTTAT
Internal bar code:GCGGTTTGGTTATTAGTAATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:316
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCTGCCTCCTCCACTTT
Suggested primer 2:CTAACAACGCACACGCACAA