Insertion junction: CLIP2.020439_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020439
Chromosome:chromosome 14
Location:603106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611850 (1 of 1) K17087 - transmembrane 9 superfamily member 3 (TM9SF3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACACCGCGCCCCTCACCAACCCCACTCCAGCTTCAACAACCCCTATC
Internal bar code:CTAGGCCCGCCCGCAGGGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:439
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTGTTCGGTCA
Suggested primer 2:AGACGCCCAAACCATCCATT