Insertion junction: CLIP2.020441_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.020441
Chromosome:chromosome 1
Location:4588843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031650 CGLD12 Conserved in the Green Lineage and Diatoms; (1 of 2) PF05637 - galactosyl transferase GMA12/MNN10 family (Glyco_transf_34) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGCTATTGAAGGCGCACTGAGGCGCGAAGCCCACGTGAGCCGCCAGCT
Internal bar code:CGCAGCATACCTATAGTTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5331
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTAATGTGGGTGGATGCA
Suggested primer 2:CCCAATCCTGAACAGACCCC