Insertion junction: CLIP2.020451_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.020451
Chromosome:chromosome 9
Location:1908818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397350 RAD3A,XPD3 (1 of 1) K15362 - fanconi anemia group J protein (BRIP1, BACH1, FANCJ); RAD3/XP-D family DNA-binding helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCG
Internal bar code:ACACGATAGAACATGTAATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1561
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGTATGCGATGCGTGTG
Suggested primer 2:ACAAACGAAACGAAAGCCCG