Insertion junction: CLIP2.020457_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.020457
Chromosome:chromosome 15
Location:1849109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g141706 ERA1 Putative chloroplast 16S rRNA processing factor; (1 of 1) K03595 - GTP-binding protein Era (era) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAATGCCGACTGTCGGGCAACATCTCAACTGAAACTCTGGATCGATCCA
Internal bar code:TCATTCGAGGCGAAGTTGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1059
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCAAGTCAAACCGTTGC
Suggested primer 2:TTGCAAGGGGTTGGGAACTT