Insertion junction: CLIP2.020457_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.020457
Chromosome:chromosome 15
Location:1849112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g141706 ERA1 Putative chloroplast 16S rRNA processing factor; (1 of 1) K03595 - GTP-binding protein Era (era) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCCCGATCTCAGGTACCGAAAGCCGTGAGGGTAGATCATCCGAGCTG
Internal bar code:TCATTCGAGGCGAAGTTGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:729
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAAGGGGTTGGGAACTT
Suggested primer 2:GTCCCAAGTCAAACCGTTGC