Insertion junction: CLIP2.020460_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.020460
Chromosome:chromosome 10
Location:382035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL CDS
Cre10.g420512 (1 of 13) 3.1.13.4 - Poly(A)-specific ribonuclease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCAAAGACGTAGATGCGAAAAGTCCTTTTTGCTTGTGTCAAACACCCA
Internal bar code:GGGCGTGCGGTTAGCGACTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1442
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTATTGTGTCCTGCGTT
Suggested primer 2:CACGCACACCTCCTTGTACT